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Jeff Woessner
DNA Technologies, Paradigm Genetics, RTP, United States of America

Faculty Member: Plant Biology > Agriculture & Biotechnology [ since 2 July 2001 ]
[ Evaluations ]
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Evaluations

Complete Chemical Synthesis, Assembly, and Cloning of a Mycoplasma genitalium Genome.
Gibson DG, Benders GA, …, Hutchison CA, Smith HO
Science 2008 Jan 24 [abstract on PubMed] [related articles] [full text]
Selected by | Jeff Woessner
Evaluated 7 Feb 2008

Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice.
Toki S, Hara N, …, Oka S, Tanaka H
Plant J 2006 Sep 47(6):969-76 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 14 Dec 2006

3' UTR seed matches, but not overall identity, are associated with RNAi off-targets.
Birmingham A, Anderson EM, …, Marshall WS, Khvorova A
Nat Methods 2006 Mar 3(3):199-204 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Norbert Perrimon / Michael Kiebler / Deyou Zheng / Jeff Woessner
Evaluated 19 May 2006

High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene.
Shaked H, Melamed-Bessudo C, Levy AA
Proc Natl Acad Sci U S A 2005 Aug 23 102(34):12265-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Venkatesan Sundaresan / Michael Lenhard / Jeff Woessner / Vitaly Citovsky / Shigeru Iida
Evaluated 26 Aug 2005

A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes.
Williams L, Carles CC, Osmont KS, Fletcher JC
Proc Natl Acad Sci U S A 2005 Jul 5 102(27):9703-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 12 Aug 2005

Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network.
Zhang LV, King OD, …, Boone C, Roth FP
J Biol 2005 4(2):6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 25 Jul 2005

microRNA172 down-regulates glossy15 to promote vegetative phase change in maize.
Lauter N, Kampani A, …, Goebel M, Moose SP
Proc Natl Acad Sci U S A 2005 Jun 28 102(26):9412-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 25 Jul 2005

A single amino acid converts a repressor to an activator of flowering.
Hanzawa Y, Money T, Bradley D
Proc Natl Acad Sci U S A 2005 May 24 102(21):7748-53 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner / Julia Kehr
Evaluated 25 May 2005

Sorghum genome sequencing by methylation filtration.
Bedell JA, Budiman MA, …, Jeddeloh JA, Martienssen RA
PLoS Biol 2005 Jan 3(1):e13 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Elizabeth Kellogg / Jeff Woessner
Evaluated 3 Mar 2005

The functional landscape of mouse gene expression.
Zhang W, Morris QD, …, Frey BJ, Hughes TR
J Biol 2004 3(5):21 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Orly Reiner / Mike Bevan / Jeff Woessner
Evaluated 3 Feb 2005

MicroRNA expression detected by oligonucleotide microarrays: system establishment and expression profiling in human tissues.
Barad O, Meiri E, …, Bentwich Z, Einat P
Genome Res 2004 Dec 14(12):2486-94 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 3 Feb 2005

A custom microarray platform for analysis of microRNA gene expression.
Thomson JM, Parker J, Perou CM, Hammond SM
Nat Methods 2004 Oct 1(1):47-53 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 3 Feb 2005

Identification of inhibitors of auxin transcriptional activation by means of chemical genetics in Arabidopsis.
Armstrong JI, Yuan S, …, Tanner VN, Theologis A
Proc Natl Acad Sci U S A 2004 Oct 12 101(41):14978-83 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 3 Feb 2005

Microarray-based rapid cloning of an ion accumulation deletion mutant in Arabidopsis thaliana.
Gong JM, Waner DA, …, Abid KB, Schroeder JI
Proc Natl Acad Sci U S A 2004 Oct 26 101(43):15404-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner / Javier Paz-Ares
Evaluated 4 Nov 2004

A Populus EST resource for plant functional genomics.
Sterky F, Bhalerao RR, …, Lundeberg J, Jansson S
Proc Natl Acad Sci U S A 2004 Sep 21 101(38):13951-6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Mary Lou Guerinot / Jeff Woessner
Evaluated 20 Sep 2004

Utility of different gene enrichment approaches toward identifying and sequencing the maize gene space.
Springer NM, Xu X, Barbazuk WB
Plant Physiol 2004 Oct 136(2):3023-33 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 2 Sep 2004

Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana.
Hirai MY, Yano M, …, Fujiwara T, Saito K
Proc Natl Acad Sci U S A 2004 Jul 6 101(27):10205-10 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Julia Kehr / Jeff Woessner / Doris Rentsch / Takashi Hirayama
Evaluated 6 Jul 2004

Production of very long chain polyunsaturated omega-3 and omega-6 fatty acids in plants.
Qi B, Fraser T, …, Stobart AK, Lazarus CM
Nat Biotechnol 2004 Jun 22(6):739-45 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Mary Lou Guerinot / Jeff Woessner
Evaluated 6 Jul 2004

A conditional marker gene allowing both positive and negative selection in plants.
Erikson O, Hertzberg M, Näsholm T
Nat Biotechnol 2004 Apr 22(4):455-8 [abstract on PubMed] [related articles] [order article]
Selected by | Ulf-Ingo Flugge / Jeff Woessner
Evaluated 7 May 2004

A tiling resolution DNA microarray with complete coverage of the human genome.
Ishkanian AS, Malloff CA, …, MacAulay C, Lam WL
Nat Genet 2004 Mar 36(3):299-303 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Ian Dunham / Jeff Woessner
Evaluated 1 Apr 2004

Rational siRNA design for RNA interference.
Reynolds A, Leake D, …, Marshall WS, Khvorova A
Nat Biotechnol 2004 Mar 22(3):326-30 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 1 Apr 2004

Chemogenomic profiling: identifying the functional interactions of small molecules in yeast.
Giaever G, Flaherty P, …, Arkin AP, Davis RW
Proc Natl Acad Sci U S A 2004 Jan 20 101(3):793-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 1 Mar 2004

Development of a system for the study of protein-protein interactions in planta: characterization of a TATA-box binding protein complex in Oryza sativa.
Zhong J, Haynes PA, …, Wang X, Budworth P
J Proteome Res 2003 Sep-Oct 2(5):514-22 [abstract on PubMed] [related articles] [order article]
Selected by | Jeff Woessner
Evaluated 12 Dec 2003

Empirical analysis of transcriptional activity in the Arabidopsis genome.
Yamada K, Lim J, …, Theologis A, Ecker JR
Science 2003 Oct 31 302(5646):842-6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Takashi Hirayama / Jeff Woessner / Detlef Weigel / Jen Sheen
Evaluated 19 Nov 2003

Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana.
Lahner B, Gong J, …, Schroeder JI, Salt DE
Nat Biotechnol 2003 Oct 21(10):1215-21 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 8 Sep 2003

Genetic manipulation of gibberellin metabolism in transgenic rice.
Sakamoto T, Morinaka Y, …, Matsuoka M, Tanaka H
Nat Biotechnol 2003 Aug 21(8):909-13 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 3 Sep 2003

Transfer of T-DNA and Vir proteins to plant cells by Agrobacterium tumefaciens induces expression of host genes involved in mediating transformation and suppresses host defense gene expression.
Veena , Jiang H, Doerge RW, Gelvin SB
Plant J 2003 Jul 35(2):219-36 [abstract on PubMed] [related articles] [order article]
Selected by | Jeff Woessner
Evaluated 31 Jul 2003

Rapid, noninvasive screening for perturbations of metabolism and plant growth using chlorophyll fluorescence imaging.
Barbagallo RP, Oxborough K, Pallett KE, Baker NR
Plant Physiol 2003 Jun 132(2):485-93 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 2 Jul 2003

A transformation method for obtaining marker-free plants of a cross-pollinating and vegetatively propagated crop.
de Vetten N, Wolters AM, …, Heeres P, Visser R
Nat Biotechnol 2003 Apr 21(4):439-42 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 4 Jun 2003

ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis.
Chinnusamy V, Ohta M, …, Agarwal M, Zhu JK
Genes Dev 2003 Apr 15 17(8):1043-54 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Thomashow / Jeff Woessner / Motoaki Seki
Evaluated 30 May 2003

Controlling gene expression in plants using synthetic zinc finger transcription factors.
Stege JT, Guan X, …, Beachy RN, Barbas CF
Plant J 2002 Dec 32(6):1077-86 [abstract on PubMed] [related articles] [order article]
Selected by | Julia Kehr / Jeff Woessner
Evaluated 27 Mar 2003

Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum.
Urban M, Daniels S, Mott E, Hammond-Kosack K
Plant J 2002 Dec 32(6):961-73 [abstract on PubMed] [related articles] [order article]
Selected by | Jeff Woessner
Evaluated 27 Mar 2003

Overexpression of a plasma membrane Na+/H+ antiporter gene improves salt tolerance in Arabidopsis thaliana.
Shi H, Lee BH, Wu SJ, Zhu JK
Nat Biotechnol 2003 Jan 21(1):81-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner / Ramon Serrano
Evaluated 21 Jan 2003

Immunomodulation of enzyme function in plants by single-domain antibody fragments.
Jobling SA, Jarman C, …, Blake C, Verhoeyen ME
Nat Biotechnol 2003 Jan 21(1):77-80 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jeff Woessner
Evaluated 21 Jan 2003

Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula.
Fedorova M, van de Mortel J, …, Gantt JS, Vance CP
Plant Physiol 2002 Oct 130(2):519-37 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 9 Dec 2002

Engineering tolerance and hyperaccumulation of arsenic in plants by combining arsenate reductase and gamma-glutamylcysteine synthetase expression.
Dhankher OP, Li Y, …, Sashti NA, Meagher RB
Nat Biotechnol 2002 Nov 20(11):1140-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Mary Lou Guerinot / Jeff Woessner
Evaluated 4 Dec 2002

Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case.
Schultz CJ, Rumsewicz MP, …, Gaspar YM, Bacic A
Plant Physiol 2002 Aug 129(4):1448-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner / Elizabeth Hood
Evaluated 26 Sep 2002

Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway.
Fowler S, Thomashow MF
Plant Cell 2002 Aug 14(8):1675-90 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 23 Sep 2002

Contrapuntal networks of gene expression during Arabidopsis seed filling.
Ruuska SA, Girke T, Benning C, Ohlrogge JB
Plant Cell 2002 Jun 14(6):1191-206 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Ian Graham / Jeff Woessner / John Shanklin / John Browse
Evaluated 22 Jul 2002

Activation tagging identifies a gene from Petunia hybrida responsible for the production of active cytokinins in plants.
Zubko E, Adams CJ, …, Scollan C, Meyer P
Plant J 2002 Mar 29(6):797-808 [abstract on PubMed] [related articles] [order article]
Selected by | Jeff Woessner
Evaluated 9 May 2002

Functional annotation of a full-length Arabidopsis cDNA collection.
Seki M, Narusaka M, …, Shinagawa A, Shinozaki K
Science 2002 Apr 5 296(5565):141-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 8 May 2002

Simultaneous suppression of multiple genes by single transgenes. Down-regulation of three unrelated lignin biosynthetic genes in tobacco.
Abbott JC, Barakate A, …, Schuch W, Halpin C
Plant Physiol 2002 Mar 128(3):844-53 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 3 Apr 2002

Functional analysis of the early steps of carotenoid biosynthesis in tobacco.
Busch M, Seuter A, Hain R
Plant Physiol 2002 Feb 128(2):439-53 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 1 Mar 2002

Overexpression of a 9-cis-epoxycarotenoid dioxygenase gene in Nicotiana plumbaginifolia increases abscisic acid and phaseic acid levels and enhances drought tolerance.
Qin X, Zeevaart JA
Plant Physiol 2002 Feb 128(2):544-51 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jeff Woessner
Evaluated 1 Mar 2002

Functional genomics and cell wall biosynthesis in loblolly pine.
Whetten R, Sun YH, Zhang Y, Sederoff R
Plant Mol Biol 2001 Sep 47(1-2):275-91 [abstract on PubMed] [related articles] [order article]
Selected by | Jeff Woessner
Evaluated 2 Nov 2001

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