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Tony Weil
Department of Molecular Physiology & Biophysics, Vanderbilt University, Nashville, United States of America

Faculty Member: CELL BIOLOGY > Control of gene expression [ since 13 November 2003 ]
[ Evaluations ]
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Evaluations

Promoter elements associated with RNA Pol II stalling in the Drosophila embryo.
Hendrix DA, Hong JW, …, Rokhsar DS, Levine MS
Proc Natl Acad Sci U S A 2008 May 27 105 [abstract on PubMed] [related articles] [full text]
Selected by | Tony Weil
Evaluated 5 Jun 2008

Nucleosome organization in the Drosophila genome.
Mavrich TN, Jiang C, …, Albert I, Pugh BF
Nature 2008 May 15 453(7193):358-62 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 22 May 2008

Nuclear myosin I acts in concert with polymeric actin to drive RNA polymerase I transcription.
Ye J, Zhao J, Hoffmann-Rohrer U, Grummt I
Genes Dev 2008 Feb 1 22(3):322-30 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 27 Feb 2008

Structural Changes in TAF4b-TFIID Correlate with Promoter Selectivity.
Liu WL, Coleman RA, …, Nogales E, Tjian R
Mol Cell 2008 Jan 18 29(1):81-91 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 1 Feb 2008

Localization of TFIIB binding regions using serial analysis of chromatin occupancy.
Yochum GS, Rajaraman V, Cleland R, McWeeney S
BMC Mol Biol 2007 8:102 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil
Evaluated 6 Dec 2007

NC2 mobilizes TBP on core promoter TATA boxes.
Schluesche P, Stelzer G, …, Lamb DC, Meisterernst M
Nat Struct Mol Biol 2007 Dec 14(12):1196-201 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil
Evaluated 6 Dec 2007

An acetylation switch in p53 mediates holo-TFIID recruitment.
Li AG, Piluso LG, …, Ladurner AG, Liu X
Mol Cell 2007 Nov 9 28(3):408-21 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Cheng-Ming Chiang / Dinah Singer / Rivka Dikstein
Evaluated 23 Nov 2007

Switching of the core transcription machinery during myogenesis.
Deato MD, Tjian R
Genes Dev 2007 Sep 1 21(17):2137-49 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Denis Guttridge / Simon Hughes / Tony Weil / Andrew D. Sharrocks
Evaluated 10 Sep 2007

Dynamics of replication-independent histone turnover in budding yeast.
Dion MF, Kaplan T, …, Friedman N, Rando OJ
Science 2007 Mar 9 315(5817):1405-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Jason Lieb / Jeffrey Hayes
Evaluated 20 Mar 2007

Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions.
Govind CK, Zhang F, …, Hofmeyer K, Hinnebusch AG
Mol Cell 2007 Jan 12 25(1):31-42 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 8 Feb 2007

A chromatin-mediated mechanism for specification of conditional transcription factor targets.
Buck MJ, Lieb JD
Nat Genet 2006 Dec 38(12):1446-51 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 3 Jan 2007

Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo.
Nalley K, Johnston SA, Kodadek T
Nature 2006 Aug 31 442(7106):1054-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Ilaria Rebay / Tony Weil / Andrew D. Sharrocks
Evaluated 7 Sep 2006

Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock.
Zanton SJ, Pugh BF
Genes Dev 2006 Aug 15 20(16):2250-65 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil
Evaluated 6 Sep 2006

Nup-PI: the nucleopore-promoter interaction of genes in yeast.
Schmid M, Arib G, …, Durussel T, Laemmli UK
Mol Cell 2006 Feb 3 21(3):379-91 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 11 Apr 2006

Transcriptional activators are dispensable for transcription in the absence of Spt6-mediated chromatin reassembly of promoter regions.
Adkins MW, Tyler JK
Mol Cell 2006 Feb 3 21(3):405-16 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Daniel Reines / Tony Weil / Kenneth Zaret / Richard Maraia
Evaluated 24 Feb 2006

Genome-wide transcriptional dependence on TAF1 functional domains.
Irvin JD, Pugh BF
J Biol Chem 2006 Mar 10 281(10):6404-12 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil
Evaluated 24 Jan 2006

The HIR corepressor complex binds to nucleosomes generating a distinct protein/DNA complex resistant to remodeling by SWI/SNF.
Prochasson P, Florens L, …, Washburn MP, Workman JL
Genes Dev 2005 Nov 1 19(21):2534-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil
Evaluated 12 Dec 2005

The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators.
Lee D, Ezhkova E, …, Tansey WP, Workman JL
Cell 2005 Nov 4 123(3):423-36 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Susan Forsburg / Benoit Coulombe / Rivka Dikstein / Cheng-Ming Chiang / Dinah Singer / Tony Weil / Michael Meisterernst
Evaluated 12 Dec 2005

Genome-wide map of nucleosome acetylation and methylation in yeast.
Pokholok DK, Harbison CT, …, Gifford DK, Young RA
Cell 2005 Aug 26 122(4):517-27 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 21 Sep 2005

Transcription of mammalian messenger RNAs by a nuclear RNA polymerase of mitochondrial origin.
Kravchenko JE, Rogozin IB, Koonin EV, Chumakov PM
Nature 2005 Aug 4 436(7051):735-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Ueli Schibler / Carl Thummel / Pamela Geyer / Cheng-Ming Chiang / Tony Weil
Evaluated 24 Aug 2005

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast.
Sekinger EA, Moqtaderi Z, Struhl K
Mol Cell 2005 Jun 10 18(6):735-48 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil
Evaluated 24 Jun 2005

Mechanism of transcriptional silencing in yeast.
Chen L, Widom J
Cell 2005 Jan 14 120(1):37-48 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Rivka Dikstein / Peter B. Becker / Susan Gasser
Evaluated 21 Jan 2005

Recruitment of histone modifications by USF proteins at a vertebrate barrier element.
West AG, Huang S, …, Litt MD, Felsenfeld G
Mol Cell 2004 Nov 5 16(3):453-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Anjana Rao
Evaluated 14 Dec 2004

Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator.
Zhao X, Patton JR, …, Ames SJ, Spanjaard RA
Mol Cell 2004 Aug 27 15(4):549-58 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Andrew D. Sharrocks
Evaluated 6 Oct 2004

Molecular architecture of the S. cerevisiae SAGA complex.
Wu PY, Ruhlmann C, Winston F, Schultz P
Mol Cell 2004 Jul 23 15(2):199-208 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tony Weil / Song Tan
Evaluated 2 Aug 2004

Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes.
Adkins MW, Howar SR, Tyler JK
Mol Cell 2004 Jun 4 14(5):657-66 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jerry Workman / Tony Weil / Fyodor Urnov
Evaluated 28 Jun 2004

Control of pancreas and liver gene expression by HNF transcription factors.
Odom DT, Zizlsperger N, …, Bell GI, Young RA
Science 2004 Feb 27 303(5662):1378-81 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Tony Weil / Brendan Lee
Evaluated 16 Mar 2004

In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer.
Bhaumik SR, Raha T, Aiello DP, Green MR
Genes Dev 2004 Feb 1 18(3):333-43 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jerry Workman / Tony Weil / Michael Meisterernst / Andrew D. Sharrocks
Evaluated 26 Feb 2004

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.
Mizuguchi G, Shen X, …, Sen S, Wu C
Science 2004 Jan 16 303(5656):343-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Susan Forsburg / Tony Weil / Pamela Geyer / Robert Dutnall / Ronald Conaway
Evaluated 28 Jan 2004

Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery.
Rodríguez-Navarro S, Fischer T, …, Reed R, Hurt E
Cell 2004 Jan 9 116(1):75-86 [abstract on PubMed] [related articles] [order article]
Selected by | Murray Stewart / Tony Weil / Peter B. Becker / Francesc Posas
Evaluated 28 Jan 2004

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