BA (1979) Chemistry, Franklin & Marshall College
PhD (1984) Northwestern University, Dept. of Biochemistry, Molecular and Cell Biology
ACS Postdoctoral Fellow (1984-87) w/Dr. Alexander Rich, Dept. of Biology, MIT

http://oregonstate.edu/dept/biochem/faculty/ho.html

Self-assembly of a nanoscale DNA box with a controllable lid. Andersen ES, Dong M, …, Gothelf KV, Kjems J Nature 2009 May 7 459(7243):73-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 14 May 2009 Minimal nucleotide duplex formation in water through enclathration in self-assembled hosts. Sawada T, Yoshizawa M, Sato S, Fujita M Nat Chem 2009 1:53-56 [full text] Selected by | P. Shing Ho Evaluated 26 Mar 2009 White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly. Wang HC, Wang HC, …, Lo CF, Wang AH Proc Natl Acad Sci U S A 2008 Dec 30 105(52):20758-63 [abstract on PubMed] [related articles] [FREE full text] Selected by | P. Shing Ho Evaluated 9 Feb 2009 Remeasuring the double helix. Mathew-Fenn RS, Das R, Harbury PA Science 2008 Oct 17 322(5900):446-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P. Shing Ho / Jim Maher Evaluated 28 Oct 2008 Rigid spin-labeled nucleoside C: a nonperturbing EPR probe of nucleic acid conformation. Cekan P, Smith AL, …, Robinson BH, Sigurdsson ST Nucleic Acids Res 2008 Sep 19 [abstract on PubMed] [related articles] [FREE full text] Selected by | P. Shing Ho Evaluated 17 Oct 2008 Crystal structure of DNA-bound Co(III) bleomycin B2: Insights on intercalation and minor groove binding. Goodwin KD, Lewis MA, Long EC, Georgiadis MM Proc Natl Acad Sci U S A 2008 Apr 1 105(13):5052-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P. Shing Ho / Janet Morrow Evaluated 1 May 2008 Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction. Hohng S, Zhou R, …, Lilley DM, Ha T Science 2007 Oct 12 318(5848):279-83 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P. Shing Ho Evaluated 12 Feb 2008 Z-DNA-forming sequences generate large-scale deletions in mammalian cells. Wang G, Christensen LA, Vasquez KM Proc Natl Acad Sci U S A 2006 Feb 21 103(8):2677-82 [abstract on PubMed] [related articles] [FREE full text] Selected by | P. Shing Ho Evaluated 24 Sep 2007 Crystal structure of T4 endonuclease VII resolving a Holliday junction. Biertümpfel C, Yang W, Suck D Nature 2007 Oct 4 449(7162):616-20 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P. Shing Ho / Malcolm White Evaluated 24 Sep 2007 The structural basis of Holliday junction resolution by T7 endonuclease I. Hadden JM, Déclais AC, …, Lilley DM, Phillips SE Nature 2007 Oct 4 449(7162):621-4 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P. Shing Ho / Malcolm White Evaluated 24 Sep 2007 Topological locking restrains replication fork reversal. Fierro-Fernández M, Hernández P, …, Stasiak A, Schvartzman JB Proc Natl Acad Sci U S A 2007 Jan 30 104(5):1500-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | P. Shing Ho Evaluated 31 Jul 2007 Correlation between mechanical strength of messenger RNA pseudoknots and ribosomal frameshifting. Hansen TM, Reihani SN, Oddershede LB, Sørensen MA Proc Natl Acad Sci U S A 2007 Apr 3 104(14):5830-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 5 Apr 2007 Nonblinking and long-lasting single-molecule fluorescence imaging. Rasnik I, McKinney SA, Ha T Nat Methods 2006 Nov 3(11):891-3 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 30 Jan 2007 NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA. Iwahara J, Zweckstetter M, Clore GM Proc Natl Acad Sci U S A 2006 Oct 10 103(41):15062-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 19 Oct 2006 Study of single-nucleotide polymorphisms by means of electrical conductance measurements. Hihath J, Xu B, Zhang P, Tao N Proc Natl Acad Sci U S A 2005 Nov 22 102(47):16979-83 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 15 Aug 2006 Facilitating RNA structure prediction with microarrays. Kierzek E, Kierzek R, Turner DH, Catrina IE Biochemistry 2006 Jan 17 45(2):581-93 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 31 May 2006 Autonomous fueled mechanical replication of nucleic acid templates for the amplified optical detection of DNA. Weizmann Y, Cheglakov Z, Pavlov V, Willner I Angew Chem Int Ed Engl 2006 Mar 27 45(14):2238-42 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 27 Apr 2006 Observing spontaneous branch migration of Holliday junctions one step at a time. McKinney SA, Freeman AD, Lilley DM, Ha T Proc Natl Acad Sci U S A 2005 Apr 19 102(16):5715-20 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 10 Feb 2006 The structural basis of myotonic dystrophy from the crystal structure of CUG repeats. Mooers BH, Logue JS, Berglund JA Proc Natl Acad Sci U S A 2005 Nov 15 102(46):16626-31 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 8 Feb 2006 Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. Ha SC, Lowenhaupt K, …, Kim YG, Kim KK Nature 2005 Oct 20 437(7062):1183-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Tom Tullius / P Shing Ho / Martin Egli / Matt Redinbo / Xiaodong Cheng Evaluated 28 Oct 2005 New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative. Bonanno JB, Almo SC, …, D'Amico KL, Burley SK J Struct Funct Genomics 2005 6(2-3):225-32 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 17 Oct 2005 A life-like virtual cell membrane using discrete automata. Broderick G, Ru'aini M, Chan E, Ellison MJ In Silico Biol 2005 5(2):163-78 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 22 Aug 2005 DNA shuffling as a tool for protein crystallization. Keenan RJ, Siehl DL, Gorton R, Castle LA Proc Natl Acad Sci U S A 2005 Jun 21 102(25):8887-92 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho / Michael Sundstrom / Reinhard Sterner Evaluated 24 Jun 2005 RNA interference improves motor and neuropathological abnormalities in a Huntington's disease mouse model. Harper SQ, Staber PD, …, Paulson HL, Davidson BL Proc Natl Acad Sci U S A 2005 Apr 19 102(16):5820-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho / Mark Westhusin Evaluated 28 Apr 2005 Rapid spontaneous accessibility of nucleosomal DNA. Li G, Levitus M, Bustamante C, Widom J Nat Struct Mol Biol 2005 Jan 12(1):46-53 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Robert Dutnall / P Shing Ho Evaluated 17 Feb 2005 Translation of DNA signals into polymer assembly instructions. Liao S, Seeman NC Science 2004 Dec 17 306(5704):2072-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 4 Jan 2005 Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen. Gai D, Zhao R, …, Finkielstein CV, Chen XS Cell 2004 Oct 1 119(1):47-60 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 8 Nov 2004 Demonstration of a universal surface DNA computer. Su X, Smith LM Nucleic Acids Res 2004 32(10):3115-23 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 7 Jul 2004 Crystal structures of a DNA octaplex with I-motif of G-quartets and its splitting into two quadruplexes suggest a folding mechanism of eight tandem repeats. Kondo J, Adachi W, …, Sunami T, Takénaka A Nucleic Acids Res 2004 32(8):2541-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 24 May 2004 Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase. Ling H, Sayer JM, …, Jerina DM, Yang W Proc Natl Acad Sci U S A 2004 Feb 24 101(8):2265-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 16 Apr 2004 Size selective recognition of siRNA by an RNA silencing suppressor. Vargason JM, Szittya G, Burgyán J, Tanaka Hall TM Cell 2003 Dec 26 115(7):799-811 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho / James Carrington / Song Tan / Phoebe Rice / Phillip Zamore Evaluated 12 Jan 2004 Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases. Eichman BF, O'Rourke EJ, Radicella JP, Ellenberger T EMBO J 2003 Oct 1 22(19):4898-909 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 3 Nov 2003 Nucleotide shuffling and ssDNA recognition in Oxytricha nova telomere end-binding protein complexes. Theobald DL, Schultz SC EMBO J 2003 Aug 15 22(16):4314-24 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 29 Oct 2003 Crystal structure of NF-kappaB (p50)2 complexed to a high-affinity RNA aptamer. Huang DB, Vu D, …, Maher LJ, Ghosh G Proc Natl Acad Sci U S A 2003 Aug 5 100(16):9268-73 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 7 Aug 2003 Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling. Wood ZA, Poole LB, Karplus PA Science 2003 Apr 25 300(5619):650-3 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho / Debbie C Crans Evaluated 8 May 2003 Displacement of the tyrosyl radical cofactor in ribonucleotide reductase obtained by single-crystal high-field EPR and 1.4-A x-ray data. Högbom M, Galander M, …, Nordlund P, Lendzian F Proc Natl Acad Sci U S A 2003 Mar 18 100(6):3209-14 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 21 Mar 2003 Structural dynamics of individual Holliday junctions. McKinney SA, Déclais AC, Lilley DM, Ha T Nat Struct Biol 2003 Feb 10(2):93-7 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Evelyn Jabri / P Shing Ho Evaluated 12 Feb 2003 A cryo-electron microscopic study of ribosome-bound termination factor RF2. Rawat UB, Zavialov AV, …, Ehrenberg M, Frank J Nature 2003 Jan 2 421(6918):87-90 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho / Anne-Catherine Dock-Bregeon Evaluated 7 Jan 2003 Structure of Alba: an archaeal chromatin protein modulated by acetylation. Wardleworth BN, Russell RJ, …, Taylor GL, White MF EMBO J 2002 Sep 2 21(17):4654-62 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho Evaluated 11 Nov 2002 Determination of DNA structure in solution: enzymatic deuteration of the ribose 2' carbon. MacDonald D, Lu P J Am Chem Soc 2002 Aug 21 124(33):9722-3 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho Evaluated 29 Aug 2002 Crystal structure of parallel quadruplexes from human telomeric DNA. Parkinson GN, Lee MP, Neidle S Nature 2002 Jun 20 417(6891):876-80 [abstract on PubMed] [related articles] [full text] [order article] Selected by | P Shing Ho Evaluated 25 Jun 2002 Flipping duplex DNA inside out: a double base-flipping reaction mechanism by Escherichia coli MutY adenine glycosylase. Bernards AS, Miller JK, Bao KK, Wong I J Biol Chem 2002 Jun 7 277(23):20960-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 24 Jun 2002 Atomic force microscopic measurement of the interdomain angle in symmetric Holliday junctions. Sha R, Liu F, Seeman NC Biochemistry 2002 May 14 41(19):5950-5 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho Evaluated 29 May 2002 Identification of a novel archaebacterial thioredoxin: determination of function through structure. Bhattacharyya S, Habibi-Nazhad B, …, Arrowsmith C, Wishart DS Biochemistry 2002 Apr 16 41(15):4760-70 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho Evaluated 23 Apr 2002 Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail. Jacobs SA, Khorasanizadeh S Science 2002 Mar 15 295(5562):2080-3 [abstract on PubMed] [related articles] [FREE full text] Selected by | Robert Dutnall / Laura Shilatifard / P Shing Ho / Song Tan Evaluated 21 Mar 2002 Structural studies of Ets-1/Pax5 complex formation on DNA. Garvie CW, Hagman J, Wolberger C Mol Cell 2001 Dec 8(6):1267-76 [abstract on PubMed] [related articles] [order article] Selected by | Song Tan / P Shing Ho / Andrew D. Sharrocks Evaluated 28 Jan 2002 Promoter clearance by T7 RNA polymerase. Initial bubble collapse and transcript dissociation monitored by base analog fluorescence. Liu C, Martin CT J Biol Chem 2002 Jan 25 277(4):2725-31 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho Evaluated 21 Dec 2001 X-ray analysis of an RNA tetraplex (UGGGGU)(4) with divalent Sr(2+) ions at subatomic resolution (0.61 A). Deng J, Xiong Y, Sundaralingam M Proc Natl Acad Sci U S A 2001 Nov 20 98(24):13665-70 [abstract on PubMed] [related articles] [FREE full text] Selected by | P Shing Ho / Scott K Silverman Evaluated 14 Dec 2001 Regulation of CSF1 promoter by the SWI/SNF-like BAF complex. Liu R, Liu H, …, Brown PO, Zhao K Cell 2001 Aug 10 106(3):309-18 [abstract on PubMed] [related articles] [order article] Selected by | P Shing Ho / Anjana Rao Evaluated 6 Sep 2001

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