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Casey M Bergman
Faculty of Life Science, University of Manchester, Manchester, United Kingdom

Faculty Member: GENOMICS & GENETICS > Bioinformatics [ since 15 March 2006 ]
[ Biography ] [ Homepage ] [ Evaluations ]
Biography

2005-present Lecturer in Bioinformatics, Faculty of Life Sciences, University of Manchester, UK
2003-2005 Postdoctoral Fellowship, Department of Genetics, University of Cambridge, UK
2001-2003 Postdoctoral Fellowship, Department of Genome Sciences, Lawrence Berkeley National Laboratory, USA
1996-2001 Ph.D., Department of Ecology and Evolution, University of Chicago, USA
1995-1996 M.A.T. (Biology), Department of Education, Cornell University, USA
1991-1995 B.S., Section of Ecology and Systematics, Cornell University, USA

Home page

http://www.bioinf.manchester.ac.uk/bergman/

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Evaluations

Resurrection of DNA function in vivo from an extinct genome.
Pask AJ, Behringer RR, Renfree MB
PLoS ONE 2008 3(5):e2240 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 27 May 2008

Jane: Suggesting Journals, Finding Experts.
Schuemie MJ, Kors JA
Bioinformatics 2008 Jan 28 [abstract on PubMed] [related articles] [full text]
Selected by | Casey Bergman
Evaluated 14 Feb 2008

Effects of recombination rate on human endogenous retrovirus fixation and persistence.
Katzourakis A, Pereira V, Tristem M
J Virol 2007 Oct 81(19):10712-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Casey Bergman
Evaluated 28 Sep 2007

Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation.
Giordano J, Ge Y, …, Benson G, Warburton PE
PLoS Comput Biol 2007 Jul 13 3(7):e137 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 24 Jul 2007

Transposon insertion site profiling chip (TIP-chip).
Wheelan SJ, Scheifele LZ, …, Irizarry RA, Boeke JD
Proc Natl Acad Sci U S A 2006 Nov 21 103(47):17632-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 24 Jul 2007

Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila.
Haag-Liautard C, Dorris M, …, Charlesworth B, Keightley PD
Nature 2007 Jan 4 445(7123):82-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Casey Bergman
Evaluated 13 Mar 2007

Identification of transposable elements using multiple alignments of related genomes.
Caspi A, Pachter L
Genome Res 16(2):260-70 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 14 Nov 2006

A mutation accumulation assay reveals a broad capacity for rapid evolution of gene expression.
Rifkin SA, Houle D, Kim J, White KP
Nature 2005 Nov 10 438(7065):220-3 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Casey Bergman
Evaluated 31 Aug 2006

The regulatory content of intergenic DNA shapes genome architecture.
Nelson CE, Hersh BM, Carroll SB
Genome Biol 2004 5(4):R25 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 30 Jun 2006

Transposon-free regions in mammalian genomes.
Simons C, Pheasant M, Makunin IV, Mattick JS
Genome Res 2006 Feb 16(2):164-72 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 2 May 2006

ReAS: Recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun.
Li R, Ye J, …, Wong GK, Wang J
PLoS Comput Biol 2005 Sep 1(4):e43 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Casey Bergman
Evaluated 24 Mar 2006

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