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John Jaenike

No longer a member of F1000[ 06-AUG-2004 - 21-MAY-2008 ]
[ Evaluations ]
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Evaluations

Palaeotemperature trend for Precambrian life inferred from resurrected proteins.
Gaucher EA, Govindarajan S, Ganesh OK
Nature 2008 Feb 7 451(7179):704-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike / Manfred Schliwa
Evaluated 8 Feb 2008

A sex-ratio meiotic drive system in Drosophila simulans. II: an X-linked distorter.
Tao Y, Araripe L, …, Xiao H, Hartl DL
PLoS Biol 2007 Nov 6 5(11):e293 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 20 Nov 2007

A sex-ratio meiotic drive system in Drosophila simulans. I: an autosomal suppressor.
Tao Y, Masly JP, …, Ke Y, Hartl DL
PLoS Biol 2007 Nov 6 5(11):e292 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 20 Nov 2007

A metagenomic survey of microbes in honey bee colony collapse disorder.
Cox-Foster DL, Conlan S, …, Pettis JS, Lipkin WI
Science 2007 Oct 12 318(5848):283-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike
Evaluated 15 Oct 2007

Adaptive variation in beach mice produced by two interacting pigmentation genes.
Steiner CC, Weber JN, Hoekstra HE
PLoS Biol 2007 Sep 5(9):e219 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Nico M. van Straalen / Edmund Brodie
Evaluated 22 Aug 2007

The automation and evaluation of nested clade phylogeographic analysis.
Panchal M, Beaumont MA
Evolution Int J Org Evolution 2007 Jun 61(6):1466-80 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike / Mike Ritchie / Richard Frankham
Evaluated 22 Jun 2007

Genome-wide mapping of in vivo protein-DNA interactions.
Johnson DS, Mortazavi A, Myers RM, Wold B
Science 2007 Jun 8 316(5830):1497-502 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jim Maher / John Jaenike / Deyou Zheng / Ulf Pettersson / Gabriele Varani / Magdalena Zernicka-Goetz
Evaluated 21 Jun 2007

Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.
Brennecke J, Aravin AA, …, Sachidanandam R, Hannon GJ
Cell 2007 Mar 23 128(6):1089-103 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Jef Boeke / Donald Rio / John Jaenike / Bino John / Michael Kiebler
Evaluated 12 Apr 2007

Global extent of horizontal gene transfer.
Choi IG, Kim SH
Proc Natl Acad Sci U S A 2007 Mar 13 104(11):4489-94 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 16 Mar 2007

Microfluidic digital PCR enables multigene analysis of individual environmental bacteria.
Ottesen EA, Hong JW, Quake SR, Leadbetter JR
Science 2006 Dec 1 314(5804):1464-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Gerard Muyzer
Evaluated 22 Dec 2006

Strict host-symbiont cospeciation and reductive genome evolution in insect gut bacteria.
Hosokawa T, Kikuchi Y, …, Shimada M, Fukatsu T
PLoS Biol 2006 Oct 4(10):e337 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 19 Oct 2006

Evolution of male-killer suppression in a natural population.
Hornett EA, Charlat S, …, Wedell N, Hurst GD
PLoS Biol 2006 Sep 4(9):e283 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 31 Aug 2006

Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach.
Whitlock MC
J Evol Biol 2005 Sep 18(5):1368-73 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike / Richard Frankham
Evaluated 13 Jul 2006

A single amino acid mutation contributes to adaptive beach mouse color pattern.
Hoekstra HE, Hirschmann RJ, …, Insel PA, Crossland JP
Science 2006 Jul 7 313(5783):101-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Artyom Kopp / Thomas Mitchell-Olds
Evaluated 13 Jul 2006

The tripartite associations between bacteriophage, Wolbachia, and arthropods.
Bordenstein SR, Marshall ML, …, Kim U, Wernegreen JJ
PLoS Pathog 2006 May 2(5):e43 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 12 Jun 2006

Population size does not influence mitochondrial genetic diversity in animals.
Bazin E, Glémin S, Galtier N
Science 2006 Apr 28 312(5773):570-2 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / David Rand / Rafael Zardoya / Richard Frankham / Ary Hoffmann
Evaluated 2 May 2006

Symbiosis and insect diversification: an ancient symbiont of sap-feeding insects from the bacterial phylum Bacteroidetes.
Moran NA, Tran P, Gerardo NM
Appl Environ Microbiol 2005 Dec 71(12):8802-10 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 21 Mar 2006

Toward automatic reconstruction of a highly resolved tree of life.
Ciccarelli FD, Doerks T, …, Snel B, Bork P
Science 2006 Mar 3 311(5765):1283-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Michael Wagner / Fiona Brinkman
Evaluated 7 Mar 2006

Hypervariable prophage WO sequences describe an unexpected high number of Wolbachia variants in the mosquito Culex pipiens.
Duron O, Fort P, Weill M
Proc Biol Sci 2006 Feb 22 273(1585):495-502 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 30 Jan 2006

Diversity and function of adaptive immune receptors in a jawless vertebrate.
Alder MN, Rogozin IB, …, Cooper MD, Pancer Z
Science 2005 Dec 23 310(5756):1970-3 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Tom Rapoport / Masaru Nonaka / Andrey Rzhetsky / David Schatz / Vincent Ling
Evaluated 5 Jan 2006

The players in a mutualistic symbiosis: insects, bacteria, viruses, and virulence genes.
Moran NA, Degnan PH, …, Dunbar HE, Ochman H
Proc Natl Acad Sci U S A 2005 Nov 22 102(47):16919-26 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Camilla Nesbo
Evaluated 24 Nov 2005

Integration and evolution of the cichlid mandible: the molecular basis of alternate feeding strategies.
Albertson RC, Streelman JT, Kocher TD, Yelick PC
Proc Natl Acad Sci U S A 2005 Nov 8 102(45):16287-92 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Sebastian Shimeld / John Jaenike / Anthony Zera
Evaluated 17 Nov 2005

Characterization of the 1918 influenza virus polymerase genes.
Taubenberger JK, Reid AH, …, Jin G, Fanning TG
Nature 2005 Oct 6 437(7060):889-93 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike
Evaluated 10 Oct 2005

Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses.
Holmes EC, Ghedin E, …, Lipman DJ, Taubenberger JK
PLoS Biol 2005 Sep 3(9):e300 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 6 Oct 2005

Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts.
Hurst GD, Jiggins FM
Proc Biol Sci 2005 Aug 7 272(1572):1525-34 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 2 Aug 2005

Selection strength and hitchhiking around two anti-malarial resistance genes.
Nash D, Nair S, …, Nosten F, Anderson TJ
Proc Biol Sci 2005 Jun 7 272(1568):1153-61 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 28 Jun 2005

Virulence and competitive ability in genetically diverse malaria infections.
de Roode JC, Pansini R, …, Walliker D, Read AF
Proc Natl Acad Sci U S A 2005 May 24 102(21):7624-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Gabriele Sorci / John Jaenike
Evaluated 3 Jun 2005

Ivory-billed woodpecker (Campephilus principalis) persists in continental North America.
Fitzpatrick JW, Lammertink M, …, Simon SD, Zollner D
Science 2005 Jun 3 308(5727):1460-2 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Virginia Dale
Evaluated 4 May 2005

Comparative metagenomics of microbial communities.
Tringe SG, von Mering C, …, Hugenholtz P, Rubin EM
Science 2005 Apr 22 308(5721):554-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Daniel Vaulot / Jeffrey Lawrence / John Jaenike / Robert Jackson / Gerard Muyzer / Christos Ouzounis
Evaluated 28 Apr 2005

Climate-driven regime shifts in the biological communities of arctic lakes.
Smol JP, Wolfe AP, …, Solovieva N, Weckström J
Proc Natl Acad Sci U S A 2005 Mar 22 102(12):4397-402 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Oswald Schmitz
Evaluated 30 Mar 2005

Age structure, residents, and transients of Miocene rodent communities.
van der Meulen AJ, Peláez-Campomanes P, Levin SA
Am Nat 2005 Apr 165(4):E108-25 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike
Evaluated 18 Mar 2005

Natural selection and developmental constraints in the evolution of allometries.
Frankino WA, Zwaan BJ, Stern DL, Brakefield PM
Science 2005 Feb 4 307(5710):718-20 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / John True
Evaluated 11 Feb 2005

The rate of DNA evolution: effects of body size and temperature on the molecular clock.
Gillooly JF, Allen AP, West GB, Brown JH
Proc Natl Acad Sci U S A 2005 Jan 4 102(1):140-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 12 Jan 2005

Integrating the universal metabolism into a phylogenetic analysis.
Cunchillos C, Lecointre G
Mol Biol Evol 2005 Jan 22(1):1-11 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / Arcady Mushegian
Evaluated 7 Dec 2004

Adaptive divergence in pigment composition promotes phytoplankton biodiversity.
Stomp M, Huisman J, …, Wollenzien UI, Stal LJ
Nature 2004 Nov 4 432(7013):104-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike / Mathew Leibold
Evaluated 15 Nov 2004

Inflammatory exposure and historical changes in human life-spans.
Finch CE, Crimmins EM
Science 2004 Sep 17 305(5691):1736-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Jaenike
Evaluated 2 Nov 2004

Molecular evolution of sex-biased genes in Drosophila.
Zhang Z, Hambuch TM, Parsch J
Mol Biol Evol 2004 Nov 21(11):2130-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 21 Oct 2004

Bacteriophage flux in endosymbionts (Wolbachia): infection frequency, lateral transfer, and recombination rates.
Bordenstein SR, Wernegreen JJ
Mol Biol Evol 2004 Oct 21(10):1981-91 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike
Evaluated 21 Sep 2004

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