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Seth J Davis
Department of Plant Developmental Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany

Faculty Member: PLANT BIOLOGY > Plant-environment interactions [ since 2 March 2004 ]
[ Sponsorship ] [ Homepage ] [ Evaluations ]
Sponsorship

Seth J Davis sponsors free access to F1000 for International Center for Tropical Agriculture (CIAT), Cali, Colombia. Supporting F1000's initiative to make itself available to scientists in all countries, including free access to developing countries (more details).

Home page

http://www.mpiz-koeln.mpg.de/english/research/couplandGroup/davis/index.html

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Evaluations

Circadian timekeeping during early Arabidopsis development.
Salome PA, Xie Q, McClung CR
Plant Physiol 2008 May 14 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 3 Jun 2008

The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels.
Leivar P, Monte E, …, Ecker JR, Quail PH
Plant Cell 2008 Feb 20(2):337-52 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 3 Jun 2008

The pea (Pisum sativum) DELLA proteins LA and CRY are important regulators of gibberellin synthesis and root growth.
Weston DE, Elliott RC, …, Murfet IC, Ross JJ
Plant Physiol 2008 Mar 28 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 4 Apr 2008

Effects of altitude on circadian rhythm of adult locomotor activity in Himalayan strains of Drosophila helvetica.
Vanlalhriatpuia K, Chhakchhuak V, …, Rajneesh BJ, Joshi DS
J Circadian Rhythms 2007 5:1 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 26 Mar 2008

Microoxen: microorganisms to move microscale loads.
Weibel DB, Garstecki P, …, Seto JE, Whitesides GM
Proc Natl Acad Sci U S A 2005 Aug 23 102(34):11963-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 5 Mar 2008

An Arabidopsis thaliana high-affinity molybdate transporter required for efficient uptake of molybdate from soil.
Tomatsu H, Takano J, …, Shibagaki N, Fujiwara T
Proc Natl Acad Sci U S A 2007 Nov 20 104(47):18807-12 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis / Ulf-Ingo Flugge
Evaluated 23 Nov 2007

Gain-of-Function Phenotypes of Chemically Synthetic CLAVATA3/ESR-Related (CLE) Peptides in Arabidopsis thaliana and Oryza sativa.
Kinoshita A, Nakamura Y, …, Fukuda H, Sawa S
Plant Cell Physiol 2007 Dec 48(12):1821-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 16 Nov 2007

Protease gene families in Populus and Arabidopsis.
García-Lorenzo M, Sjödin A, Jansson S, Funk C
BMC Plant Biol 2006 6:30 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 3 Sep 2007

Indel arrays: an affordable alternative for genotyping.
Salathia N, Lee HN, …, Jander G, Queitsch C
Plant J 2007 Aug 51(4):727-37 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Sheila McCormick / Seth J Davis
Evaluated 15 Aug 2007

Mechanism of auxin perception by the TIR1 ubiquitin ligase.
Tan X, Calderon-Villalobos LI, …, Estelle M, Zheng N
Nature 2007 Apr 5 446(7136):640-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Christopher Schofield / Emmanuel Liscum / Anthony Means / Christian Hardtke / Tai-ping Sun / Seth J Davis
Evaluated 31 Jul 2007

Characterization of Arabidopsis thaliana mismatch specific endonucleases: application to mutation discovery by TILLING in pea.
Triques K, Sturbois B, …, Caboche M, Bendahmane A
Plant J 2007 Sep 51(6):1116-25 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 31 Jul 2007

A functional link between rhythmic changes in chromatin structure and the Arabidopsis biological clock.
Perales M, Más P
Plant Cell 2007 Jul 19(7):2111-23 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis / C. Robertson McClung
Evaluated 31 Jul 2007

Phenotypic diversity and altered environmental plasticity in Arabidopsis thaliana with reduced Hsp90 levels.
Sangster TA, Bahrami A, …, Queitsch C, Lindquist S
PLoS ONE 2007 2:e648 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 31 Jul 2007

Pea LATE BLOOMER1 is a GIGANTEA ortholog with roles in photoperiodic flowering, deetiolation, and transcriptional regulation of circadian clock gene homologs.
Hecht V, Knowles CL, …, Lambert MJ, Weller JL
Plant Physiol 2007 Jun 144(2):648-61 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 13 Jun 2007

Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation.
Park JH, Lee KH, Kim TY, Lee SY
Proc Natl Acad Sci U S A 2007 May 8 104(19):7797-802 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 1 May 2007

A single IGF1 allele is a major determinant of small size in dogs.
Sutter NB, Bustamante CD, …, Wayne RK, Ostrander EA
Science 2007 Apr 6 316(5821):112-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis / Anthony Zera / Darryl Nishimura
Evaluated 11 Apr 2007

A G protein-coupled receptor is a plasma membrane receptor for the plant hormone abscisic acid.
Liu X, Yue Y, …, Wu WH, Ma L
Science 2007 Mar 23 315(5819):1712-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis / Emmanuel Liscum / Elena Alvarez-Buylla / Martin Robert McAinsh / Caren Chang
Evaluated 13 Mar 2007

Detection and resolution of genetic loci affecting circadian period in Brassica oleracea.
Salathia N, Lynn JR, Millar AJ, King GJ
Theor Appl Genet 2007 Feb 114(4):683-92 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 27 Feb 2007

The human circadian clock entrains to sun time.
Roenneberg T, Kumar CJ, Merrow M
Curr Biol 2007 Jan 23 17(2):R44-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 27 Feb 2007

Quinone sensing by the circadian input kinase of the cyanobacterial circadian clock.
Ivleva NB, Gao T, LiWang AC, Golden SS
Proc Natl Acad Sci U S A 2006 Nov 14 103(46):17468-73 [abstract on PubMed] [related articles] [FREE full text]
Selected by | C. Robertson McClung / Seth J Davis
Evaluated 11 Jan 2007

Genetic characterization and functional analysis of the GID1 gibberellin receptors in Arabidopsis.
Griffiths J, Murase K, …, Sun TP, Thomas SG
Plant Cell 2006 Dec 18(12):3399-414 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 10 Jan 2007

Thermostable red and green light-producing firefly luciferase mutants for bioluminescent reporter applications.
Branchini BR, Ablamsky DM, …, Fraga H, Southworth TL
Anal Biochem 2007 Feb 15 361(2):253-62 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 8 Jan 2007

Development of a near-isogenic line population of Arabidopsis thaliana and comparison of mapping power with a recombinant inbred line population.
Keurentjes JJ, Bentsink L, …, Vreugdenhil D, Koornneef M
Genetics 2007 Feb 175(2):891-905 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 5 Jan 2007

Comparative overviews of clock-associated genes of Arabidopsis thaliana and Oryza sativa.
Murakami M, Tago Y, Yamashino T, Mizuno T
Plant Cell Physiol 2007 Jan 48(1):110-21 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 7 Dec 2006

The Mg-chelatase H subunit is an abscisic acid receptor.
Shen YY, Wang XF, …, Xu YH, Zhang DP
Nature 2006 Oct 19 443(7113):823-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Martin Robert McAinsh / Seth J Davis
Evaluated 27 Nov 2006

Cold and light control seed germination through the bHLH transcription factor SPATULA.
Penfield S, Josse EM, …, Halliday KJ, Graham IA
Curr Biol 2005 Nov 22 15(22):1998-2006 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 20 Jul 2006

The UGT73C5 of Arabidopsis thaliana glucosylates brassinosteroids.
Poppenberger B, Fujioka S, …, Yoshida S, Bowles D
Proc Natl Acad Sci U S A 2005 Oct 18 102(42):15253-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 20 Jul 2006

A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping.
Spooner DM, McLean K, …, Waugh R, Bryan GJ
Proc Natl Acad Sci U S A 2005 Oct 11 102(41):14694-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 20 Jul 2006

Identification and characterization of Arabidopsis gibberellin receptors.
Nakajima M, Shimada A, …, Matsuoka M, Yamaguchi I
Plant J 2006 Jun 46(5):880-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Judy Callis / Seth J Davis
Evaluated 20 Jul 2006

GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin.
Ueguchi-Tanaka M, Ashikari M, …, Yamaguchi I, Matsuoka M
Nature 2005 Sep 29 437(7059):693-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Yunde Zhao / Patrick Masson / Simon Gilroy / Judy Callis / Tai-ping Sun / Philip Benfey / Seth J Davis
Evaluated 20 Jul 2006

Gene expression changes in Arabidopsis thaliana seedling roots exposed to the munition hexahydro-1,3,5-trinitro-1,3,5-triazine.
Ekman DR, Wolfe NL, Dean JF
Environ Sci Technol 2005 Aug 15 39(16):6313-20 [abstract on PubMed] [related articles] [order article]
Selected by | Seth J Davis
Evaluated 20 Jul 2006

ELF4 is a phytochrome-regulated component of a negative-feedback loop involving the central oscillator components CCA1 and LHY.
Kikis EA, Khanna R, Quail PH
Plant J 2005 Oct 44(2):300-13 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 19 Jul 2006

Isolation of a rice regeneration quantitative trait loci gene and its application to transformation systems.
Nishimura A, Ashikari M, …, Yamamoto T, Matsuoka M
Proc Natl Acad Sci U S A 2005 Aug 16 102(33):11940-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 19 Jul 2006

A divergent external loop confers antagonistic activity on floral regulators FT and TFL1.
Ahn JH, Miller D, …, Brady RL, Weigel D
EMBO J 2006 Feb 8 25(3):605-14 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 6 Feb 2006

Genetic and molecular analysis of phytochromes from the filamentous fungus Neurospora crassa.
Froehlich AC, Noh B, …, Loros J, Dunlap JC
Eukaryot Cell 2005 Dec 4(12):2140-52 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 3 Feb 2006

Multiple heme oxygenase family members contribute to the biosynthesis of the phytochrome chromophore in Arabidopsis.
Emborg TJ, Walker JM, Noh B, Vierstra RD
Plant Physiol 2006 Mar 140(3):856-68 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 3 Feb 2006

PHYTOCLOCK 1 encoding a novel GARP protein essential for the Arabidopsis circadian clock.
Onai K, Ishiura M
Genes Cells 2005 Oct 10(10):963-72 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 2 Feb 2006

Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
Czechowski T, Stitt M, …, Udvardi MK, Scheible WR
Plant Physiol 2005 Sep 139(1):5-17 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Lee Sweetlove / Seth J Davis
Evaluated 2 Feb 2006

Temperature synchronization of the Drosophila circadian clock.
Glaser FT, Stanewsky R
Curr Biol 2005 Aug 9 15(15):1352-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 2 Feb 2006

Goal-driven behavioral adaptations in gap-climbing Drosophila.
Pick S, Strauss R
Curr Biol 2005 Aug 23 15(16):1473-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 21 Sep 2005

Inverted repeat PCR for the rapid assembly of constructs to induce RNA interference.
Pawloski LC, Deal RB, …, Burgos-Rivera B, Meagher RB
Plant Cell Physiol 2005 Nov 46(11):1872-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 21 Sep 2005

Cloning and characterization of micro-RNAs from moss.
Arazi T, Talmor-Neiman M, …, Huijser P, Baulcombe DC
Plant J 2005 Sep 43(6):837-48 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Julia Kehr / Seth J Davis
Evaluated 21 Sep 2005

Design and fabrication of adjustable red-green-blue LED light arrays for plant research.
Folta KM, Koss LL, …, Wheeler R, Sager JC
BMC Plant Biol 2005 5:17 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 21 Sep 2005

Plastid division is mediated by combinatorial assembly of plastid division proteins.
Maple J, Aldridge C, Møller SG
Plant J 2005 Sep 43(6):811-23 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis / Katherine Osteryoung
Evaluated 21 Sep 2005

Nitric oxide is required for, and promotes auxin-mediated activation of, cell division and embryogenic cell formation but does not influence cell cycle progression in alfalfa cell cultures.
Otvös K, Pasternak TP, …, Dudits D, Fehér A
Plant J 2005 Sep 43(6):849-60 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 21 Sep 2005

The Arabidopsis F-box protein TIR1 is an auxin receptor.
Kepinski S, Leyser O
Nature 2005 May 26 435(7041):446-51 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patrick Masson / Yunde Zhao / Tai-ping Sun / Philip Benfey / Vivian Irish / Wolf B. Frommer / Seth J Davis / Emmanuel Liscum
Evaluated 20 Sep 2005

Epistasis and balanced polymorphism influencing complex trait variation.
Kroymann J, Mitchell-Olds T
Nature 2005 May 5 435(7038):95-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Julin Maloof / Seth J Davis
Evaluated 4 Jul 2005

Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro.
Nakajima M, Imai K, …, Oyama T, Kondo T
Science 2005 Apr 15 308(5720):414-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | C. Robertson McClung / Ueli Schibler / Martin Egli / Katherine Osteryoung / Seth J Davis
Evaluated 30 Jun 2005

Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis.
Harmer SL, Kay SA
Plant Cell 2005 Jul 17(7):1926-40 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 29 Jun 2005

Autoregulation and homodimerization are involved in the activation of the plant steroid receptor BRI1.
Wang X, Li X, …, Asami T, Chory J
Dev Cell 2005 Jun 8(6):855-65 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Xing Wang Deng / Seth J Davis / Kay Schneitz / Thierry Gaude
Evaluated 28 Jun 2005

Identification of novel clock-controlled genes by cDNA macroarray analysis in Chlamydomonas reinhardtii.
Kucho K, Okamoto K, …, Fukuzawa H, Ishiura M
Plant Mol Biol 2005 Apr 57(6):889-906 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 28 Jun 2005

The COP9 signalosome regulates the Neurospora circadian clock by controlling the stability of the SCFFWD-1 complex.
He Q, Cheng P, He Q, Liu Y
Genes Dev 2005 Jul 1 19(13):1518-31 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis / Dieter Wolf
Evaluated 28 Jun 2005

The stability of the Arabidopsis transcriptome in transgenic plants expressing the marker genes nptII and uidA.
El Ouakfaoui S, Miki B
Plant J 2005 Mar 41(6):791-800 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 13 Apr 2005

A mouse model for study of systemic HIV-1 infection, antiviral immune responses, and neuroinvasiveness.
Potash MJ, Chao W, …, Brooks AI, Volsky DJ
Proc Natl Acad Sci U S A 2005 Mar 8 102(10):3760-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 12 Apr 2005

Phloem long-distance trafficking of GIBBERELLIC ACID-INSENSITIVE RNA regulates leaf development.
Haywood V, Yu TS, Huang NC, Lucas WJ
Plant J 2005 Apr 42(1):49-68 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Seth J Davis
Evaluated 11 Apr 2005

Photoperiodic induction of synchronous flowering near the Equator.
Borchert R, Renner SS, …, Spichiger R, von Hildebrand P
Nature 2005 Feb 10 433(7026):627-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Richard M. Amasino / Seth J Davis
Evaluated 11 Apr 2005

Rhox: a new homeobox gene cluster.
Maclean JA, Chen MA, …, Macleod C, Wilkinson MF
Cell 2005 Feb 11 120(3):369-82 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Brant Weinstein / Seth J Davis
Evaluated 11 Apr 2005

Gene transfer to plants by diverse species of bacteria.
Broothaerts W, Mitchell HJ, …, Roa-Rodríguez C, Jefferson RA
Nature 2005 Feb 10 433(7026):629-33 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patrick Masson / Daniel Cosgrove / Seth J Davis
Evaluated 11 Apr 2005

Glycolipids as receptors for Bacillus thuringiensis crystal toxin.
Griffitts JS, Haslam SM, …, Adang MJ, Aroian RV
Science 2005 Feb 11 307(5711):922-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Carleen Collins / Seth J Davis
Evaluated 11 Apr 2005

Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis.
Pagnussat GC, Yu HJ, …, Ye D, Sundaresan V
Development 2005 Feb 132(3):603-14 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 19 Jan 2005

Identification of a vinyl reductase gene for chlorophyll synthesis in Arabidopsis thaliana and implications for the evolution of Prochlorococcus species.
Nagata N, Tanaka R, Satoh S, Tanaka A
Plant Cell 2005 Jan 17(1):233-40 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis
Evaluated 19 Jan 2005

The genetic architecture of response to long-term artificial selection for oil concentration in the maize kernel.
Laurie CC, Chasalow SD, …, Rocheford TR, Dudley JW
Genetics 2004 Dec 168(4):2141-55 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Seth J Davis / Trudy Mackay
Evaluated 19 Jan 2005

A clock gene, period, plays a key role in long-term memory formation in Drosophila.
Sakai T, Tamura T, Kitamoto T, Kidokoro Y
Proc Natl Acad Sci U S A 2004 Nov 9 101(45):16058-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Ralph Greenspan / Louis Ptacek / Randolf Menzel / Seth J Davis
Evaluated 19 Jan 2005

Visualization of the movement of single histidine kinase molecules in live Caulobacter cells.
Deich J, Judd EM, McAdams HH, Moerner WE
Proc Natl Acad Sci U S A 2004 Nov 9 101(45):15921-6 [abstract on PubMed] [related articles] [