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John Helmann
Department of Microbiology, Cornell University, United States of America

Faculty Member: CHEMICAL BIOLOGY > Bioinorganic chemistry [ since 6 August 2003 ]
[ Biography ] [ Homepage ] [ Evaluations ]
Biography

John Helmann earned bachelor's degrees in Chemistry and Biology (University of California, Santa Cruz) in 1982. He then joined the Department of Biochemistry at the University of California at Berkeley where he studied bacterial RNA polymerase with Dr. Michael Chamberlin and earned a Ph.D. in 1987. From 1987 to 1990, Dr. Helmann worked as a post-doctoral fellow with Dr. Christopher T. Walsh at the Harvard Medical School. His post-doctoral research, on the regulation of bacterial mercuric ion resistance determinants, was supported by the Jane Coffin Childs Memorial Medical Research Foundation. Dr. Helmann joined the Section of Microbiology at Cornell as an Assistant Professor in 1990 and joined the graduate field of Biochemistry, Molecular, and Cell Biology in 1991. He was promoted to Associate Professor in 1996 and Professor in 2002. He serves as Editor for Molecular Microbiology and Archives of Microbiology and a member of the Editorial Board for the Journal of Bacteriology.

The Helmann laboratory addresses three main areas of interest related to transcriptional control mechanisms in the model Gram positive bacterium, Bacillus subtilis. One project addresses global responses to cell envelope stress and the roles of extracytoplasmic function (ECF) sigma factors in gene regulation. A second investigates mechanisms of metal ion homeostasis and the roles of the metalloregulatory proteins Fur, Zur, and MntR. A third project is focused in two transcription factors, PerR and OhrR, that sense reactive oxygen species and coordinate oxidative stress responses.

Home page

http://www.micro.cornell.edu/research/labs/helmann-lab/index.cfm

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Evaluations

A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptide.
Wadler CS, Vanderpool CK
Proc Natl Acad Sci U S A 2007 Dec 18 104(51):20454-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann
Evaluated 6 Dec 2007

Structure and mechanism of a metal-sensing regulatory RNA.
Dann CE, Wakeman CA, …, Irnov I, Winkler WC
Cell 2007 Sep 7 130(5):878-92 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Robert Batey / John Helmann / Janet Morrow / Walter Schaffner / Sabine Müller
Evaluated 20 Sep 2007

Protein oxidation implicated as the primary determinant of bacterial radioresistance.
Daly MJ, Gaidamakova EK, …, Kemner KM, Fredrickson JK
PLoS Biol 2007 Apr 5(4):e92 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann / Judy Wall
Evaluated 10 Apr 2007

Control of Fur synthesis by the non-coding RNA RyhB and iron-responsive decoding.
Vecerek B, Moll I, Bläsi U
EMBO J 2007 Feb 21 26(4):965-75 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann
Evaluated 2 Mar 2007

Regulation of the yeast TSA1 peroxiredoxin by ZAP1 is an adaptive response to the oxidative stress of zinc deficiency.
Wu CY, Bird AJ, Winge DR, Eide DJ
J Biol Chem 2007 Jan 26 282(4):2184-95 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann
Evaluated 5 Dec 2006

The effects of mitochondrial iron homeostasis on cofactor specificity of superoxide dismutase 2.
Yang M, Cobine PA, …, Winge DR, Culotta VC
EMBO J 2006 Apr 19 25(8):1775-83 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann
Evaluated 5 May 2006

Nur, a nickel-responsive regulator of the Fur family, regulates superoxide dismutases and nickel transport in Streptomyces coelicolor.
Ahn BE, Cha J, …, Thompson CJ, Roe JH
Mol Microbiol 2006 Mar 59(6):1848-58 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann / Michael Maroney
Evaluated 9 Mar 2006

Fatty acid transduction of nitric oxide signaling: multiple nitrated unsaturated fatty acid derivatives exist in human blood and urine and serve as endogenous peroxisome proliferator-activated receptor ligands.
Baker PR, Lin Y, …, Chen YE, Freeman BA
J Biol Chem 2005 Dec 23 280(51):42464-75 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann
Evaluated 22 Dec 2005

Metal binding characteristics and role of iron oxidation in the ferric uptake regulator from Escherichia coli.
Mills SA, Marletta MA
Biochemistry 2005 Oct 18 44(41):13553-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann
Evaluated 20 Oct 2005

Recognition of antimicrobial peptides by a bacterial sensor kinase.
Bader MW, Sanowar S, …, Le Moual H, Miller SI
Cell 2005 Aug 12 122(3):461-72 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Charles Bevins / John Helmann / Lora Hooper / Timo Korhonen / Victor DiRita
Evaluated 25 Aug 2005

The metal permease ZupT from Escherichia coli is a transporter with a broad substrate spectrum.
Grass G, Franke S, …, Maguire ME, Rensing C
J Bacteriol 2005 Mar 187(5):1604-11 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann
Evaluated 11 Mar 2005

Are respiratory enzymes the primary sources of intracellular hydrogen peroxide?
Seaver LC, Imlay JA
J Biol Chem 2004 Nov 19 279(47):48742-50 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann / Ramon Serrano
Evaluated 28 Oct 2004

Fur functions as an activator and as a repressor of putative virulence genes in Neisseria meningitidis.
Delany I, Rappuoli R, Scarlato V
Mol Microbiol 2004 May 52(4):1081-90 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Helmann
Evaluated 16 Jun 2004

A tautomeric zinc sensor for ratiometric fluorescence imaging: application to nitric oxide-induced release of intracellular zinc.
Chang CJ, Jaworski J, …, Sheng M, Lippard SJ
Proc Natl Acad Sci U S A 2004 Feb 3 101(5):1129-34 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann
Evaluated 5 Feb 2004

Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR.
Changela A, Chen K, …, O'Halloran TV, Mondragón A
Science 2003 Sep 5 301(5638):1383-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann / Barry Stoddard / Antonio Rosato
Evaluated 19 Sep 2003

Comparative genomics of bacterial zinc regulons: enhanced ion transport, pathogenesis, and rearrangement of ribosomal proteins.
Panina EM, Mironov AA, Gelfand MS
Proc Natl Acad Sci U S A 2003 Aug 19 100(17):9912-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Helmann
Evaluated 10 Sep 2003

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