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Patricia C. Weber
Imiplex, Yardley, United States of America

Faculty Member: STRUCTURAL BIOLOGY > Biomacromolecule-ligand interactions [ since 1 March 2002 ]
[ Sponsorship ] [ Biography ] [ Evaluations ]
Sponsorship

Patricia C. Weber sponsors free access to F1000 for Institute of Research in Physical Chemistry of Cordoba, National University of Córdoba, Argentina. Supporting F1000's initiative to make itself available to scientists in all countries, including free access to developing countries (more details).

Biography

Patricia set up sponsorship of the Institute of Research in Physical Chemistry of Cordoba with help from José Duca, Class of 1990.

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Evaluations

A novel hemoglobin, Bonn, causes falsely decreased oxygen saturation measurements in pulse oximetry.
Zur B, Hornung A, …, Ludwig M, Stoffel-Wagner B
Clin Chem 2008 Mar 54(3):594-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 23 Jun 2008

Crystal structure of the NS3 protease-helicase from dengue virus.
Luo D, Xu T, …, Vasudevan SG, Lescar J
J Virol 2008 Jan 82(1):173-83 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Richard Kuhn / Patricia C. Weber
Evaluated 30 Apr 2008

Prediction of reversibly oxidized protein cysteine thiols using protein structure properties.
Sanchez R, Riddle M, Woo J, Momand J
Protein Sci 2008 Mar 17(3):473-81 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 19 Mar 2008

Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.
Rasmussen SG, Choi HJ, …, Weis WI, Kobilka BK
Nature 2007 Nov 15 450(7168):383-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Leonardo Pardo / Fred Dyda / Carmen Dessauer / Arthur Christopoulos / Patricia C. Weber / Ian Hall / Marc Caron / Stephan Nussberger
Evaluated 3 Dec 2007

High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor.
Cherezov V, Rosenbaum DM, …, Kobilka BK, Stevens RC
Science 2007 Nov 23 318(5854):1258-65 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Xiayang Qiu / Mark von Zastrow / Peter Artymiuk / Patricia C. Weber / Ram Samudrala / Petra Fromme / Marc Caron
Evaluated 3 Dec 2007

Determination of the sites of tyrosine O-sulfation in peptides and proteins.
Yu Y, Hoffhines AJ, Moore KL, Leary JA
Nat Methods 2007 Jul 4(7):583-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 16 Aug 2007

A decade of fragment-based drug design: strategic advances and lessons learned.
Hajduk PJ, Greer J
Nat Rev Drug Discov 2007 Mar 6(3):211-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 9 May 2007

Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Zhou T, Xu L, …, Nabel GJ, Kwong PD
Nature 2007 Feb 15 445(7129):732-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber / Rino Rappuoli
Evaluated 6 Mar 2007


Effects of additives on surfactant phase behavior relevant to bacteriorhodopsin crystallization.
Berger BW, Gendron CM, Lenhoff AM, Kaler EW
Protein Sci 2006 Dec 15(12):2682-96 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Petra Fromme
Evaluated 22 Jan 2007

Hydrogen exchange and mass spectrometry: A historical perspective.
Englander SW
J Am Soc Mass Spectrom 2006 Nov 17(11):1481-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 30 Oct 2006

Structure of the catalytic domain of the hepatitis C virus NS2-3 protease.
Lorenz IC, Marcotrigiano J, Dentzer TG, Rice CM
Nature 2006 Aug 17 442(7104):831-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Daniel Lamarre / Robert Booth / Peter Artymiuk / Robert Lanford / Patricia C. Weber / Liang Tong
Evaluated 14 Aug 2006

Structure and dynamics of dark-state bovine rhodopsin revealed by chemical cross-linking and high-resolution mass spectrometry.
Jacobsen RB, Sale KL, …, Young MM, Schoeniger JS
Protein Sci 2006 Jun 15(6):1303-17 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 13 Jun 2006

Extended polyglutamine tracts cause aggregation and structural perturbation of an adjacent beta barrel protein.
Ignatova Z, Gierasch LM
J Biol Chem 2006 May 5 281(18):12959-67 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 9 May 2006

Characterization and identification of vaccine candidate proteins through analysis of the group A Streptococcus surface proteome.
Rodríguez-Ortega MJ, Norais N, …, Telford JL, Grandi G
Nat Biotechnol 2006 Feb 24(2):191-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber / Victor Nizet
Evaluated 4 Apr 2006

RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP.
Dumont S, Cheng W, …, Pyle AM, Bustamante C
Nature 2006 Jan 5 439(7072):105-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 20 Jan 2006

Structure of a V3-containing HIV-1 gp120 core.
Huang CC, Tang M, …, Wyatt R, Kwong PD
Science 2005 Nov 11 310(5750):1025-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 6 Dec 2005

Structural basis of energy transduction in the transport cycle of MsbA.
Dong J, Yang G, McHaourab HS
Science 2005 May 13 308(5724):1023-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | D. Peter Tieleman / Christoph Benning / Patricia C. Weber
Evaluated 16 Jun 2005

Structure of the zinc-binding domain of an essential component of the hepatitis C virus replicase.
Tellinghuisen TL, Marcotrigiano J, Rice CM
Nature 2005 May 19 435(7040):374-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 26 May 2005

Crystal structures of the RNA-dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
Biswal BK, Cherney MM, …, Bedard J, James MN
J Biol Chem 2005 May 6 280(18):18202-10 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 20 May 2005

Modulation of human nuclear receptor LRH-1 activity by phospholipids and SHP.
Ortlund EA, Lee Y, …, Moore DD, Redinbo MR
Nat Struct Mol Biol 2005 Apr 12(4):357-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 25 Apr 2005

Protein aggregation determinants from a simplified model: cooperative folders resist aggregation.
Clark LA
Protein Sci 2005 Mar 14(3):653-62 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 7 Mar 2005

Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor.
Kim J, Lee J, …, Logan TM, Blaber M
Protein Sci 2005 Feb 14(2):351-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 15 Feb 2005

Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition.
Ohren JF, Chen H, …, Tecle H, Hasemann CA
Nat Struct Mol Biol 2004 Dec 11(12):1192-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 20 Dec 2004

Crystal structure of human coactosin-like protein at 1.9 A resolution.
Li X, Liu X, …, Liu Y, Rao Z
Protein Sci 2004 Nov 13(11):2845-51 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 9 Nov 2004

Crystal structures of human cytochrome P450 3A4 bound to metyrapone and progesterone.
Williams PA, Cosme J, …, Tickle IJ, Jhoti H
Science 2004 Jul 30 305(5684):683-6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Michael Gelb
Evaluated 19 Aug 2004

The structure of human microsomal cytochrome P450 3A4 determined by X-ray crystallography to 2.05-A resolution.
Yano JK, Wester MR, …, Stout CD, Johnson EF
J Biol Chem 2004 Sep 10 279(37):38091-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 19 Aug 2004

Analysis of the "thermodynamic information content" of a Homo sapiens structural database reveals hierarchical thermodynamic organization.
Larson SA, Hilser VJ
Protein Sci 2004 Jul 13(7):1787-801 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 5 Jul 2004

EGFR mutations in lung cancer: correlation with clinical response to gefitinib therapy.
Paez JG, Jänne PA, …, Johnson BE, Meyerson M
Science 2004 Jun 4 304(5676):1497-500 [abstract on PubMed] [related articles] [FREE full text]
Selected by | William Kaelin / Patricia C. Weber / Joachim Herz / Charles Streuli / Alfred Wittinghofer / Charles Brenner
Evaluated 14 May 2004

Structure of fosfomycin resistance protein FosA from transposon Tn2921.
Pakhomova S, Rife CL, Armstrong RN, Newcomer ME
Protein Sci 2004 May 13(5):1260-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 30 Apr 2004

An improved crystal form of Plasmodium falciparum peptide deformylase.
Robien MA, Nguyen KT, …, Pei D, Hol WG
Protein Sci 2004 Apr 13(4):1155-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 8 Apr 2004

In vitro resistance studies of hepatitis C virus serine protease inhibitors, VX-950 and BILN 2061: structural analysis indicates different resistance mechanisms.
Lin C, Lin K, …, Gates CA, Kwong AD
J Biol Chem 2004 Apr 23 279(17):17508-14 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 3 Mar 2004

Rapid refinement of crystallographic protein construct definition employing enhanced hydrogen/deuterium exchange MS.
Pantazatos D, Kim JS, …, Lesley SA, Woods VL
Proc Natl Acad Sci U S A 2004 Jan 20 101(3):751-6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Celerino Abad-Zapatero / Song Tan / David Waugh
Evaluated 23 Jan 2004

Crystal structure of an invertebrate caspase.
Forsyth CM, Lemongello D, …, Friesen PD, Fisher AJ
J Biol Chem 2004 Feb 20 279(8):7001-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 18 Dec 2003

X-ray crystal structure of IRF-3 and its functional implications.
Takahasi K, Suzuki NN, …, Fujita T, Inagaki F
Nat Struct Biol 2003 Nov 10(11):922-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 5 Nov 2003

Crystal structure of IRF-3 reveals mechanism of autoinhibition and virus-induced phosphoactivation.
Qin BY, Liu C, …, Derynck R, Lin K
Nat Struct Biol 2003 Nov 10(11):913-21 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 5 Nov 2003

Staphylocoagulase is a prototype for the mechanism of cofactor-induced zymogen activation.
Friedrich R, Panizzi P, …, Bode W, Bock PE
Nature 2003 Oct 2 425(6957):535-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 28 Oct 2003

The crystal structure of Escherichia coli heat shock protein YedU reveals three potential catalytic active sites.
Zhao Y, Liu D, …, White MA, Fox RO
Protein Sci 2003 Oct 12(10):2303-11 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 29 Sep 2003

Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.
Kantardjieff KA, Rupp B
Protein Sci 2003 Sep 12(9):1865-71 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 3 Sep 2003

Crystal structure of human cytochrome P450 2C9 with bound warfarin.
Williams PA, Cosme J, …, Matak Vinkovi¿ D, Jhoti H
Nature 2003 Jul 24 424(6947):464-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber / Jane Endicott
Evaluated 4 Aug 2003

Structure of human dCK suggests strategies to improve anticancer and antiviral therapy.
Sabini E, Ort S, …, Konrad M, Lavie A
Nat Struct Biol 2003 Jul 10(7):513-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 17 Jul 2003

The crystal structure of the proprotein processing proteinase furin explains its stringent specificity.
Henrich S, Cameron A, …, Bode W, Than ME
Nat Struct Biol 2003 Jul 10(7):520-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber / Barry Stoddard
Evaluated 23 Jun 2003

Keeping G proteins at bay: a complex between G protein-coupled receptor kinase 2 and Gbetagamma.
Lodowski DT, Pitcher JA, …, Lefkowitz RJ, Tesmer JJ
Science 2003 May 23 300(5623):1256-62 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Tetsuji Okada / Stephen Sprang / David Cowburn
Evaluated 5 Jun 2003

Insights into antifolate resistance from malarial DHFR-TS structures.
Yuvaniyama J, Chitnumsub P, …, Walkinshaw MD, Yuthavong Y
Nat Struct Biol 2003 May 10(5):357-65 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Carol Sibley / Vivian Cody / Karen Anderson / Patricia C. Weber
Evaluated 22 May 2003

A novel protein-mineral interface.
Alexeev D, Zhu H, …, Campopiano DJ, Sadler PJ
Nat Struct Biol 2003 Apr 10(4):297-302 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 23 Apr 2003

Substrate complexes of hepatitis C virus RNA polymerase (HC-J4): structural evidence for nucleotide import and de-novo initiation.
O'Farrell D, Trowbridge R, Rowlands D, Jäger J
J Mol Biol 2003 Feb 28 326(4):1025-35 [abstract on PubMed] [related articles] [order article]
Selected by | Patricia C. Weber
Evaluated 21 Mar 2003

Non-nucleoside analogue inhibitors bind to an allosteric site on HCV NS5B polymerase. Crystal structures and mechanism of inhibition.
Wang M, Ng KK, …, Bethell RC, James MN
J Biol Chem 2003 Mar 14 278(11):9489-95 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 21 Mar 2003

The unusual catalytic triad of poliovirus protease 3C.
Sárkány Z, Polgár L
Biochemistry 2003 Jan 21 42(2):516-22 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 12 Feb 2003

Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra alpha-helical domain.
Anand K, Palm GJ, …, Ziebuhr J, Hilgenfeld R
EMBO J 2002 Jul 1 21(13):3213-24 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 10 Jan 2003

Extension of a local backbone description using a structural alphabet: a new approach to the sequence-structure relationship.
de Brevern AG, Valadié H, Hazout S, Etchebest C
Protein Sci 2002 Dec 11(12):2871-86 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 4 Dec 2002

Construction of a fluorescent biosensor family.
de Lorimier RM, Smith JJ, …, Loew L, Hellinga HW
Protein Sci 2002 Nov 11(11):2655-75 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Andrew Ellington
Evaluated 6 Nov 2002

The crystal structure of human alpha1-tryptase reveals a blocked substrate-binding region.
Marquardt U, Zettl F, …, Bode W, Sommerhoff C
J Mol Biol 2002 Aug 16 321(3):491-502 [abstract on PubMed] [related articles] [order article]
Selected by | Patricia C. Weber / Richard L. Stevens
Evaluated 9 Oct 2002

Crystal structure of the ADP-dependent glucokinase from Pyrococcus horikoshii at 2.0-A resolution: a large conformational change in ADP-dependent glucokinase.
Tsuge H, Sakuraba H, …, Katunuma N, Ohshima T
Protein Sci 2002 Oct 11(10):2456-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 9 Oct 2002

Nucleotide control of interdomain interactions in the conformational reaction cycle of SecA.
Hunt JF, Weinkauf S, …, Oliver DB, Deisenhofer J
Science 2002 Sep 20 297(5589):2018-26 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber / Wil Konings
Evaluated 3 Oct 2002

The structural basis for specificity in human ABO(H) blood group biosynthesis.
Patenaude SI, Seto NO, …, Palcic MM, Evans SV
Nat Struct Biol 2002 Sep 9(9):685-90 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 10 Sep 2002

A novel fucose recognition fold involved in innate immunity.
Bianchet MA, Odom EW, Vasta GR, Amzel LM
Nat Struct Biol 2002 Aug 9(8):628-34 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 15 Aug 2002

Overcoming drug resistance in HIV-1 chemotherapy: the binding thermodynamics of Amprenavir and TMC-126 to wild-type and drug-resistant mutants of the HIV-1 protease.
Ohtaka H, Velázquez-Campoy A, Xie D, Freire E
Protein Sci 2002 Aug 11(8):1908-16 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 6 Aug 2002

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.
Murakami KS, Masuda S, …, Muzzin O, Darst SA
Science 2002 May 17 296(5571):1285-90 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Robert Dutnall / Patricia C. Weber
Evaluated 2 Jul 2002

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution.
Vassylyev DG, Sekine S, …, Borukhov S, Yokoyama S
Nature 2002 Jun 13 417(6890):712-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 2 Jul 2002

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution.
Murakami KS, Masuda S, Darst SA
Science 2002 May 17 296(5571):1280-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 1 Jul 2002

Understanding protein hydrogen bond formation with kinetic H/D amide isotope effects.
Krantz BA, Srivastava AK, …, Sauer RT, Sosnick TR
Nat Struct Biol 2002 Jun 9(6):458-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patricia C. Weber
Evaluated 10 Jun 2002

Divergent regulation of dihydrofolate reductase between malaria parasite and human host.
Zhang K, Rathod PK
Science 2002 Apr 19 296(5567):545-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | David Matthews / Ruma Banerjee / Patricia C. Weber / Karen Anderson
Evaluated 8 May 2002

Breaking the singleton of germination protease.
Pei J, Grishin NV
Protein Sci 2002 Mar 11(3):691-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 27 Mar 2002

Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3).
Berisio R, Vitagliano L, Mazzarella L, Zagari A
Protein Sci 2002 Feb 11(2):262-70 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Patricia C. Weber
Evaluated 14 Mar 2002

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